Syllego System Third-Party Software Licenses

Listed below are respective licenses, and acknowledgments for software not subject to licensing, for all third-party software applications that are included in the Rosetta Syllego™ system.

W3C
Apache Software Foundation, version 1.1
Apache Software Foundation, version 2.0
Jython 2.0, 2.1 License

libwww program, governed by: W3C
Copyright © 1994-2000 World Wide Web Consortium, (Massachusetts Institute of Technology, Institut National de Recherche en Informatique et en Automatique, Keio University). All Rights Reserved. This program is distributed under the W3C's Software Intellectual Property License. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See W3C License http://www.w3.org/Consortium/Legal/ for more details.

Copyright © 1995 CERN. "This product includes computer software created and made available by CERN. This acknowledgment shall be mentioned in full in any product which includes the CERN computer software included herein or parts thereof." http://www.w3.org/Library/
Applications governed by the Apache Open Source Effort (http://apache.org), version 2.0:
Apache Derby 10.2.2.0 (http://db.apache.org/derby/), copyright Apache Software Foundation

Tapestry 4.0.2 (http://tapestry.apache.org/) copyright Apache Software Foundation

Apache Tomcat 5.5.20 (http://tomcat.apache.org/) copyright Apache Software Foundation

Jakarta POI 2.5.1 (http://jakarta.apache.org/poi/index.html) copyright Apache Software Foundation

Axis 1.4 (http://ws.apache.org/axis/index.html) copyright Apache Software Foundation

Scriptella 0.9 (http://scriptella.javaforge.com) copyright Intland Software

AntInstaller 0.8 (http://antinstaller.sourceforge.net/index.html) copyright SourceForge, Inc.

Ant 1.7.0 (http://ant.apache.org/index.html) copyright Apache Software Foundation

Ant-Contrib 1.0b3 (http://ant-contrib.sourceforge.net/) governed by the Apache Open Source Effort (http://apache.org), version 1.1. copyright SourceForge, Inc.
Java HDF5 Interface (http://www.hdfgroup.org/hdf-java-html/)
Copyright Notice and Statement for NCSA Hierarchical Data Format (HDF) Software Library and Utilities

NCSA HDF5 (Hierarchical Data Format 5) Software Library and Utilities Copyright 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 by the Board of Trustees of the University of Illinois. All rights reserved.
Sferyx JSyndrome HTML Editor Component (http://www.sferyx.com/) copyright Sferyx Srl
CERN (European Organization for Nuclear Research)
Written by Wolfgang Hoschek. Copyright © 1999 CERN - European Organization for Nuclear Research. Permission to use, copy, modify, distribute and sell this software and its documentation for any purpose is hereby granted without fee, provided that the above copyright notice appear in all copies and that both that copyright notice and this permission notice appear in supporting documentation. CERN makes no representations about the suitability of this software for any purpose. It is provided "as is" without expressed or implied warranty.

The Rosetta Syllego system dynamically links (run-time links only) to the software, which is governed by GNU Lesser General Public License.

License

The library is free software licensed with the LGPL, version 2. This allows the library to be linked into any software, free or proprietary. If you would like to use this library under a different license, please get in touch.

In addition to the provisions of the LGPL, you are permitted to use the library directly as part of your build process provided you meet all of the following conditions:

Any modifications to the existing libmspack source code are all published and distributed under the LGPL license.

You must not use function calls, structures or definitions unless they are defined in the public library interface, "mspack.h".
PYTHON SOFTWARE FOUNDATION LICENSE VERSION 2 (http://www.jython.org)
Copyright (c) 2007 Python Software Foundation; All Rights Reserved.
Jython 2.2.1 was modifie as follows. The find_module method of the imp.java class was updated to allow the jar work under java webstar.
JNIWrapper (jniwrap:jar (3.6.1)) (http://www.teamdev.com/jniwrapper)
JNIWrapper is redistributed under a Software Development Services agreement between Rosetta Inpharmatics LLC and TEAMDEV, effective July 1, 2006, and amended January 1, 2009.
Affymetrix Fusion (1.1.0) (http://www.affymetrix.com/partners_programs/programs/developer/fusion/index.affx).
This SDK is currently being released by Affymetrix under the GNU Lesser General Public License (LGPL) Version 2.1, an OSI approved open source license.
JGoodies (http://www.jgoodies.com/index.html)
Copyright (c) 2002-2007 JGoodies Karsten Lentzsch. All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
- Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
- Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
- Neither the name of JGoodies Karsten Lentzsch nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Portions of this program were created using SpringUtilities (http://java.sun.com/docs/books/tutorial/uiswing/examples/layout/SpringGridProject/src/layout/SpringUtilities.java).
Copyright 1995 - 2008 Sun Microsystems, Inc. All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions
* are met:
*
* - Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
*
* - Redistributions in binary form must reproduce the above copyright
* notice, this list of conditions and the following disclaimer in the
* documentation and/or other materials provided with the distribution.
*
* - Neither the name of Sun Microsystems nor the names of its
* contributors may be used to endorse or promote products derived
* from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS
* IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
* PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
* LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
* NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
ImageEncoder.java, Copyright (C)1996,1998 by Jef Poskanzer. All rights reserved.
THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

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Syllego System Third-Party Software Licenses